CDS

Accession Number TCMCG075C29647
gbkey CDS
Protein Id XP_017984657.1
Location complement(join(5072130..5072376,5075498..5075703,5076585..5076801,5076952..5077632,5078108..5078238))
Gene LOC18586518
GeneID 18586518
Organism Theobroma cacao

Protein

Length 493aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018129168.1
Definition PREDICTED: probable pectate lyase 13 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category G
Description Pectate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02361        [VIEW IN KEGG]
R06240        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
RC00705        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01728        [VIEW IN KEGG]
EC 4.2.2.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016837        [VIEW IN EMBL-EBI]
GO:0030570        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031225        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042547        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0046658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTCCTTTAACCTGCATTCTCTTAATATGCACACTGGGTTCTGTCTCTTCCATTGCCAGAGCTGCCTTCAATCTTAGCCTCCCTCACCAGCACCCTGACCCTGAATCCGTTGTTCAAGATGTTCAAAGGAGGTTAAACGTGTCCTTGTCAAGAAGACAAGCCCTGTCTGTAACCCAAAAAGACCAATGTCGCACTGGAAACCCCATCGACGACTGCTGGCGGTGCGACCCAAACTGGTACAACAACCGCCAACACTTAGCCGACTGCTCCATAGGCTTTGCACAAGGCACTCTAGGTGGAAAAGGTGGCCGGATCTACACCGTCACAGATTCCTCCGACAGCAACCCTGCTAACCCCAAGCCGGGCACTCTCCGTCACGCTGTCATCCAAAACGAACCCCTATGGATCATCTTCTCAACCAACATGGTCATCAAGCTCAAACATGAGCTGATTTTCAACTCATACAAAACCGTCGATGGCCGGGGAGCCAACGTTCATATCACCGGAAATGGGTGTATAACTTTGCAGTATGTGTCTCATGTCATCATCCATAACATCCATGTACACCATTGTAAGCCTTCGGGGAACACTGACATTGCTTCATCTCCAACTCACGTTGGATGGAGAGGGCGGTCGGACGGTGATGGGATTTCCATATTTAGTTCTCAGAAGCTCTGGATTGATCATTGCTCCCTTAGTTACTGCACTGATGGCCTGATCGATGCTATCATGGGGTCCACCGGGATTACCATTAGTAATAACTACTTTTCTCACCATGATGAAGTTATGCTTCTGGGCCATGATGACAGGTATTTGCCTGATTCCGGAATGCAGGTGACCATAGCTTTTAATCACTTCGGACAAGGGTTGGTGCAAAGAATGCCAAGGTGCCGGCGGGGGTATATACACGTGGTGAACAATGATTTTACTGCATGGGAAATGTATGCTATCGGTGGTAGTGCAAACCCTACCATCAATAGTCAGGGGAATCGATATACTGCACCAGGGGACCCCAATGCTAAAGAGGTGACGAAGCGAGTGGACACAGACGAGAAAGACTGGACAGGCTGGAACTGGAGGACAGAGGGGGACTTAATGGTAAATGGAGCATACTTTGTGCCCTCTGGAGCTGGCTTAAGCGCTCAGTATGCAAAAGCTTCCAGTGTGGAGCCCAAGTCTGCTGCTCTCATTGAACAGCTCACTTTCAACGCTGGCGTTTTCGGTGAGGCTAGGGAAGAGACAGGGAGCTTTTCTTATCCAGGATACAGCAGCGGTGGGTCCAGCAGCACCAGCACCGGTAGTGCACGGTCCGGCGATGATGGCGACTACTTTGGAATGATATTCGGGAGCGGCTCACCACTGCCCCCAGCATCCACATCCATAGCCTCAATCTTTTTGTCTCTTCTAATTATTTTGGTTTTGTATTCTATCACCAACCAAGGTGCTCTACCATCATTATTATCATTATTATTGTTATAG
Protein:  
MLPLTCILLICTLGSVSSIARAAFNLSLPHQHPDPESVVQDVQRRLNVSLSRRQALSVTQKDQCRTGNPIDDCWRCDPNWYNNRQHLADCSIGFAQGTLGGKGGRIYTVTDSSDSNPANPKPGTLRHAVIQNEPLWIIFSTNMVIKLKHELIFNSYKTVDGRGANVHITGNGCITLQYVSHVIIHNIHVHHCKPSGNTDIASSPTHVGWRGRSDGDGISIFSSQKLWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDRYLPDSGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPGDPNAKEVTKRVDTDEKDWTGWNWRTEGDLMVNGAYFVPSGAGLSAQYAKASSVEPKSAALIEQLTFNAGVFGEAREETGSFSYPGYSSGGSSSTSTGSARSGDDGDYFGMIFGSGSPLPPASTSIASIFLSLLIILVLYSITNQGALPSLLSLLLL